FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2953903
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA114940.3891123032814551No Hit
GTCGACCGATGCTCAA102180.34591521793369656No Hit
CATTCAACTAGGCATG100540.34036324144699404No Hit
GGGGGGGGGGGGGGGG82370.2788514043961498No Hit
ACTGGGCACTTCTCGC78910.267138088149814No Hit
TGTAAGCTGTTGTGAC75210.25461228753957055No Hit
GCTTTAGGAACTAGTC70890.2399875689892322No Hit
CATCAGTGATTCGCAA45450.1538642264150177No Hit
TAGTTGCGACATAGCT44880.15193457605073693No Hit
CAGGAGCCTCGTGCAC35900.12153411943452443No Hit
CAGGAGCCTTCCAATG32960.11158118597665528No Hit
TCCTTAAACAGGGAGG29670.10044337948808746No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)