FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004948728

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948728
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16207309
Sequences flagged as poor quality0
Sequence length34
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACACCG9200.09.1308545
TATACTG16350.08.8199775
GTGTAGG25500.08.7305121
CGTCAGA24200.08.6209211
TAGGACC17750.08.5975514
GTATACG4153.6379788E-128.4347971
TAGACTG20500.08.3320895
TCTATAC13150.08.3045883
CTAGGAC24050.08.2665163
TAGGACT21550.08.2509334
GTATTAG18100.08.1999281
TTATACT18200.08.0772694
TATACAC27150.08.0445923
CTATACT17550.07.9775494
GTATAGG13900.07.85710571
ATTAGAC11600.07.84521153
TACATCG4657.2759576E-127.82831575
TCTACAC19950.07.6494973
TAGACCG6050.07.6367145
TTAGACT16000.07.6128254
Produced by FastQC (version 0.11.5)