FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5408063
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG171740.3175628686278248No Hit
ACTGTCCACAGGTCCC98890.18285659763948756No Hit
CTGGTGGACGCGGTTC92690.17139223415111843No Hit
GTGGTTAACGGCCTGT78930.14594874357047985No Hit
AAGACAAACAGTACGG70540.13043487104347712No Hit
GTGTACTGACAGTCCG64890.11998750754197945No Hit
AGCTATCGACGGTTTA57560.10643367135331079No Hit
TGTCCCATGGCCAGCT55630.1028649259448346No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)