FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004948747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17547252
Sequences flagged as poor quality0
Sequence length34
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGAGAC18450.011.00321822
CTTATAC24200.09.7827191
CACGAGA21300.09.72787121
TATACAC36450.09.7165963
CCCACGA22200.09.33280719
ATCTCCG23000.09.12947710
TCTCCGA24000.08.6907311
TAGACTG25150.08.6831845
CCACGAG25400.08.65315320
GGACCGT9750.08.4710996
GTATACG4001.6370905E-118.4050341
TTAGACT18650.08.3317564
CTAGGAC27950.08.2640563
TTATACA34750.08.1777462
TATACTG20400.08.1659975
GACTCTA27600.08.01598226
AGGACTG44400.08.0083515
ACTCTAT28000.07.9515927
TAGACAG31200.07.94165565
TTATACT21200.07.85784534
Produced by FastQC (version 0.11.5)