FastQCFastQC Report
Wed 8 May 2024
EGAF00004948790

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948790
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31309798
Total Bases500.9 Mbp
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG919280.29360777096038754No Hit
GAGCGATGAGGTGTCC317990.10156245658307983No Hit
CTTAGAGACAATCGCT315610.1008023111487337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)