Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004948795 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3270559 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGTAGATC | 3182996 | 97.32269009670824 | Illumina Single End PCR Primer 1 (100% over 8bp) |
TGTAGCTC | 18950 | 0.5794116540933828 | No Hit |
TGTAGATA | 16498 | 0.5044397609093736 | No Hit |
AGTAGATC | 6042 | 0.18473906142650232 | No Hit |
TGTAGAAC | 5935 | 0.18146744944824417 | Illumina DpnII expression Adapter 1 (100% over 8bp) |
TGTACATC | 5487 | 0.16776948527759322 | No Hit |
TGAAGATC | 5192 | 0.15874962047772262 | No Hit |
TCTAGATC | 3422 | 0.104630431678499 | ABI Dynabead EcoP Oligo (100% over 8bp) |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)