FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4837574
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG142790.29516861137421363No Hit
ACTGTCCACAGGTCCC90080.186209037835907No Hit
CTGGTGGACGCGGTTC84060.17376478375317875No Hit
GTGGTTAACGGCCTGT72310.14947574962160787No Hit
AAGACAAACAGTACGG63580.1314295140498109No Hit
GTGTACTGACAGTCCG59810.12363635160929838No Hit
AGCTATCGACGGTTTA51170.10577615970319007No Hit
TGTCCCATGGCCAGCT50580.10455654011700907No Hit
GGGTGAATGGACAAAT50190.10375035089902501No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)