FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4259539
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA177120.4158196462105406No Hit
CATTCAACTAGGCATG155740.36562642107514454No Hit
GTCGACCGATGCTCAA140280.32933141356376827No Hit
GGGGGGGGGGGGGGGG122620.2878715278813036No Hit
TGTAAGCTGTTGTGAC121320.28481955441656953No Hit
ACTGGGCACTTCTCGC120750.28348138143587837No Hit
GCTTTAGGAACTAGTC91820.21556323348606501No Hit
TAGTTGCGACATAGCT69320.16274061582720573No Hit
CATCAGTGATTCGCAA67840.15926606142120076No Hit
CAGGAGCCTCGTGCAC58390.13708056200447982No Hit
CAGGAGCCTTCCAATG51120.12001298732092838No Hit
TCCTTAAACAGGGAGG47400.11127964786799699No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)