FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13913475
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCGACTTTCCATT411110.2954761481225934No Hit
AACTTACCTGAATCTC392130.28183469622075No Hit
GGGGGGGGGGGGGGGG367660.2642474292008287No Hit
GCTGGACACGCCCTGA172550.1240164660517951No Hit
ATTACCTACCGAGGAT153540.11035345231870541No Hit
CATAGTCGACTACTCC139660.1003775117287378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)