FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948821

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948821
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14632714
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTACCTAC1440355498.43392005064815No Hit
TTACCTAA379300.2592137043066652No Hit
TTACATAC365940.2500834773371502No Hit
TTACCAAC334730.22875455640013193No Hit
ATACCTAC285330.19499458542003897No Hit
TAACCTAC147510.10080836678691321No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)