FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14213447
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG373620.26286375148829133No Hit
CCTAGCACTACAGGCA303500.21353018729376483No Hit
CGTTCTCGAATAACCC162590.11439167430673221No Hit
CATTCCTCTACGCGAA160030.11259056300698908No Hit
TCGATGATGTCCCGTT153900.10827774571502606No Hit
AGCTGCTCTACGTAAA145710.102515596674051No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)