FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004948853

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948853
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7915326
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG228330.28846569301125435No Hit
ACTGTCCACAGGTCCC149380.18872248597215074No Hit
CTGGTGGACGCGGTTC141030.17817333107947797No Hit
GTGGTTAACGGCCTGT124210.15692341667292037No Hit
AAGACAAACAGTACGG101750.12854808506939575No Hit
GTGTACTGACAGTCCG99770.1260466088193967No Hit
GGGTGAATGGACAAAT88880.11228848944440191No Hit
TGTCCCATGGCCAGCT83780.1058452930428892No Hit
AGCTATCGACGGTTTA83060.10493566531561682No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)