FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004948917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20423124
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATGCTCT2010050298.42031023265588No Hit
TATGCTCA815620.3993610380077015No Hit
AATGCTCT404490.19805491069828496No Hit
TAAGCTCT246830.1208581018261457No Hit
TATGCACT244910.11991799099883055No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)