FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004948926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13832272
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG376000.2718280843523031No Hit
CCTAGCACTACAGGCA297410.2150116770404746No Hit
CGTTCTCGAATAACCC161400.11668365110229181No Hit
CATTCCTCTACGCGAA157660.1139798291994258No Hit
TCGATGATGTCCCGTT152300.11010483310333978No Hit
AGCTGCTCTACGTAAA138660.10024383557524028No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)