FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948927

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948927
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3157598
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCGGTGAGTCTTGA89730.2841717026676607No Hit
GGGGGGGGGGGGGGGG83100.2631747296520963No Hit
GGACACCTGGCTCCTT72210.22868648890707427No Hit
GTTAAGAGAGTACGTT60520.1916646767574593No Hit
CGCTTACTGATCACAC55840.17684328404059035No Hit
TTGTGGTGAAAGACAT52710.1669306859201203No Hit
ATCTTACTGGTTTGGT52550.1664239716392017No Hit
TACCAGTGATACGATC52270.16553722164759416No Hit
ATAGATGGAGAGTAAT50870.16110347168955644No Hit
ATTCCTAACTGCGTGC49380.156384694948502No Hit
ATATGCCGAGAACAGC45340.14359015935530742No Hit
TGGAACACTTGAGGCA44110.1396947933207457No Hit
CTTGACGCTCAGGGTA43380.13738290941405462No Hit
CTTTCTGCTCTTGTGA42260.1338359094476244No Hit
AGCTCTGCTGGCCTGT40890.12949716841725895No Hit
ACTGGAACTCTGGAAG40030.1267735791573215No Hit
GCGGTTCGAAGCAAGC38410.12164309706302069No Hit
TGTGACTGACCGTTAA37670.11929954351377217No Hit
TGTACCCTGCTGAGAG36410.11530916855153822No Hit
AGGTAGCGATTGACCA36060.1142007310620288No Hit
ACGCTCTTGCCTCAAA35730.11315563285763418No Hit
AGTTCACGACCAGAGA35300.11179383822766545No Hit
ACCCTTTCTAGGTGAC34450.10910191861028543No Hit
TTCCAAACTCCGCTAG34180.1082468382612353No Hit
ACATGTGTGTCAATGC33400.10577660614175713No Hit
CAGTGGAGAGATCATC33240.10526989186083853No Hit
ACACTCCACCGTACAT32700.10355973116273826No Hit
TCCCAGACTCCTAACA32630.10333804366483637No Hit
TCAGTCCACCCAGCAC32610.10327470437972155No Hit
GCTATACGACAGGTGA32100.10165955260929352No Hit
CACAGCTCTCTCTGGG31690.1003610972644396No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)