FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004948954

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948954
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6119172
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG167970.27449792226791464No Hit
ACTGTCCACAGGTCCC113470.1854335848052645No Hit
CTGGTGGACGCGGTTC110050.17984459335347985No Hit
GTGGTTAACGGCCTGT95970.15683494433560619No Hit
GTGTACTGACAGTCCG78870.12888998707668292No Hit
AAGACAAACAGTACGG78210.1278114097789701No Hit
GGGTGAATGGACAAAT68340.1116817765540828No Hit
TGTCCCATGGCCAGCT63450.10369049930284686No Hit
AGCTATCGACGGTTTA62270.10176213383117846No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)