FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004948993

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004948993
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4779785
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG142470.2980678001207167No Hit
ACTGTCCACAGGTCCC89100.18641005819299403No Hit
CTGGTGGACGCGGTTC81510.1705306828654427No Hit
GTGGTTAACGGCCTGT70930.1483957960452196No Hit
AAGACAAACAGTACGG61130.12789278178830218No Hit
GTGTACTGACAGTCCG59020.12347835729012917No Hit
AGCTATCGACGGTTTA50790.10626000960294239No Hit
GGGTGAATGGACAAAT49540.10364482921302945No Hit
TGTCCCATGGCCAGCT49130.10278705004513802No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)