FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004949012

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949012
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2736085
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG90880.33215342359612365No Hit
ACTGTCCACAGGTCCC50100.18310834641467644No Hit
CTGGTGGACGCGGTTC46780.170974220464642No Hit
GTGGTTAACGGCCTGT42120.1539425858480274No Hit
AAGACAAACAGTACGG35400.12938194537084924No Hit
GTGTACTGACAGTCCG34340.1255077967241515No Hit
GGGTGAATGGACAAAT30220.1104497850030244No Hit
AGCTATCGACGGTTTA28620.10460201346083912No Hit
TGTCCCATGGCCAGCT28450.10398068773448194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)