FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3273741
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG97960.29922953587348544No Hit
ACTGTCCACAGGTCCC59490.18171871262876324No Hit
CTGGTGGACGCGGTTC57950.177014614167706No Hit
GTGGTTAACGGCCTGT50890.1554490718722098No Hit
GTGTACTGACAGTCCG42180.1288434240827237No Hit
AAGACAAACAGTACGG41690.12734666548147822No Hit
GGGTGAATGGACAAAT36500.11149324274583726No Hit
AGCTATCGACGGTTTA33990.10382617317619201No Hit
TGTCCCATGGCCAGCT33570.10254323723226731No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)