FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004949113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8069875
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG243230.30140491643303025No Hit
ACTGTCCACAGGTCCC145590.1804117164144426No Hit
CTGGTGGACGCGGTTC140940.17464954537709693No Hit
GTGGTTAACGGCCTGT118990.14744961972769094No Hit
AAGACAAACAGTACGG103100.12775910407534194No Hit
GTGTACTGACAGTCCG99240.12297588252606143No Hit
AGCTATCGACGGTTTA85660.10614786474387769No Hit
GGGTGAATGGACAAAT82630.10239315974534921No Hit
TGTCCCATGGCCAGCT82020.10163726203937483No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)