Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004949127 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5547513 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GCCAACAA | 5410477 | 97.52977595545968 | No Hit |
CCCAACAA | 19580 | 0.3529509529765861 | RNA PCR Primer, Index 36 (100% over 8bp) |
GCCAAAAA | 16207 | 0.29214893232336725 | No Hit |
GCCCACAA | 12223 | 0.22033296722333054 | No Hit |
GACAACAA | 11913 | 0.2147448775694622 | No Hit |
GCAAACAA | 9028 | 0.16273959159717155 | No Hit |
GCCACCAA | 8814 | 0.15888200712643666 | No Hit |
GCCAACAC | 8702 | 0.15686308441278102 | No Hit |
ACCAACAA | 7322 | 0.1319870724052382 | No Hit |
GCCAACCA | 7305 | 0.13168062877905828 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)