FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004949144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2556682
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA95890.37505642078287404No Hit
GTCGACCGATGCTCAA89990.3519796361064849No Hit
CATTCAACTAGGCATG84520.33058471878786644No Hit
GGGGGGGGGGGGGGGG76740.3001546535705262No Hit
ACTGGGCACTTCTCGC68500.26792538141231487No Hit
TGTAAGCTGTTGTGAC65030.2543531029670487No Hit
GCTTTAGGAACTAGTC61020.23866871202597742No Hit
NNNNNNNNNNNNNNNN55330.21641330443129023No Hit
TAGTTGCGACATAGCT38910.1521894392810682No Hit
CATCAGTGATTCGCAA38170.14929506289792788No Hit
CAGGAGCCTCGTGCAC34110.1334151059850228No Hit
CAGGAGCCTTCCAATG28930.11315447130304042No Hit
TCCTTAAACAGGGAGG26290.10282858799021545No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)