FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004949146

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949146
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6630702
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG204880.30898689158402837No Hit
CCTAGCACTACAGGCA137100.20676543750571208No Hit
CGTTCTCGAATAACCC80140.12086201430859056No Hit
CATTCCTCTACGCGAA76370.1151763418111687No Hit
TCGATGATGTCCCGTT70220.1059013057742604No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)