FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004949150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2521615
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACACCTGGCTCCTT76750.30436843054946927No Hit
GGGGGGGGGGGGGGGG74660.29608009152864334No Hit
TCGCGGTGAGTCTTGA69460.2754583867878324No Hit
GTTAAGAGAGTACGTT47990.19031454048298413No Hit
CGCTTACTGATCACAC46160.1830572866991987No Hit
TACCAGTGATACGATC41910.16620300878603592No Hit
TTGTGGTGAAAGACAT40220.15950095474527237No Hit
ATCTTACTGGTTTGGT38990.15462312843158055No Hit
ATAGATGGAGAGTAAT38900.15426621431106652No Hit
ATTCCTAACTGCGTGC38170.15137124422245268No Hit
ATATGCCGAGAACAGC36570.14502610430220314No Hit
GCGGTTCGAAGCAAGC36250.14375707631815324No Hit
TGGAACACTTGAGGCA35750.14177422009307528No Hit
CTTGACGCTCAGGGTA33710.13368416669475713No Hit
GCTATACGACAGGTGA33420.1325341100842119No Hit
AGGTAGCGATTGACCA32910.13051159673463236No Hit
CTTTCTGCTCTTGTGA32870.13035296823662612No Hit
AGCTCTGCTGGCCTGT31840.1262682844129655No Hit
AGTTCACGACCAGAGA30290.12012143011522379No Hit
ACTGGAACTCTGGAAG29430.11671091740808966No Hit
ACGCTCTTGCCTCAAA29140.11556086079754443No Hit
TGTGACTGACCGTTAA29030.11512463242802728No Hit
TGTACCCTGCTGAGAG27690.1098105777448183No Hit
ACCCTTTCTAGGTGAC27540.1092157208772949No Hit
TCAGTCCACCCAGCAC26980.10699492190520757No Hit
TTCCAAACTCCGCTAG26910.10671732203369666No Hit
CACAGCTCTCTCTGGG26410.10473446580861868No Hit
ACACTCCACCGTACAT25830.10243435258752824No Hit
GGGAGCTCTTGATGAA25780.10223606696502044No Hit
TCCCAGACTCCTAACA25630.10164121009749703No Hit
ACATGTGTGTCAATGC25250.10013423936643777No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)