Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004949183 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4296522 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GCCAACAA | 4198631 | 97.72162227960197 | No Hit |
GCCAAAAA | 14432 | 0.33589959506782463 | No Hit |
CCCAACAA | 12930 | 0.30094108676739 | RNA PCR Primer, Index 36 (100% over 8bp) |
GACAACAA | 7991 | 0.18598764302847745 | No Hit |
GCAAACAA | 7206 | 0.16771705114043406 | No Hit |
GCCCACAA | 7083 | 0.16485427050065146 | No Hit |
GCCACCAA | 6294 | 0.14649058005521676 | No Hit |
GCCAACCA | 5390 | 0.12545030608478205 | No Hit |
ACCAACAA | 5318 | 0.1237745320517386 | No Hit |
TCCAACAA | 5007 | 0.1165361192145647 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)