FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5287327
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG176940.3346492471526728No Hit
ACTGTCCACAGGTCCC95280.18020447761222258No Hit
CTGGTGGACGCGGTTC92260.1744927068062936No Hit
GTGGTTAACGGCCTGT80320.15191040765967379No Hit
AAGACAAACAGTACGG67370.12741788052828962No Hit
GTGTACTGACAGTCCG65600.12407025326786106No Hit
TGTCCCATGGCCAGCT55470.1049112339751258No Hit
AGCTATCGACGGTTTA54830.1037007924798296No Hit
GGGTGAATGGACAAAT53940.10201752227543331No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)