FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004949195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16032037
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG500850.3124057161295224No Hit
CACCAGGTGGTTTGGT307570.19184711212929462No Hit
TCCGAGTCTAAAGTAC257470.1605971842505104No Hit
TCTTTCCACATCAGGG169450.10569461634850269No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)