FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004949220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14073980
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG424720.3017767539814608No Hit
CCTAGCACTACAGGCA295410.20989798194966883No Hit
CGTTCTCGAATAACCC161410.11468681922242323No Hit
CATTCCTCTACGCGAA159110.11305259777262722No Hit
TCGATGATGTCCCGTT149660.10633807920716101No Hit
AGCTGCTCTACGTAAA142660.10136436175126012No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)