FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004949240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13945244
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG368450.26421194207860405No Hit
CCTAGCACTACAGGCA299630.21486178370202771No Hit
CGTTCTCGAATAACCC171160.12273718552360935No Hit
CATTCCTCTACGCGAA154610.11086934011337486No Hit
TCGATGATGTCCCGTT150740.10809420043134418No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)