FastQCFastQC Report
Fri 9 Sep 2022
EGAF00004949330

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949330
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7312309
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG203330.2780653826308489No Hit
ACTGTCCACAGGTCCC136080.1860971684867256No Hit
CTGGTGGACGCGGTTC128230.17536184534871269No Hit
GTGGTTAACGGCCTGT111470.15244158855978324No Hit
AAGACAAACAGTACGG94690.12949398062910086No Hit
GTGTACTGACAGTCCG91130.12462547739708484No Hit
GGGTGAATGGACAAAT78420.10724382681311743No Hit
AGCTATCGACGGTTTA75460.10319585783368837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)