Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004949332 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3267755 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGTAGATC | 3159910 | 96.69972198038103 | Illumina Single End PCR Primer 1 (100% over 8bp) |
TGTAGCTC | 27750 | 0.8492068713841765 | No Hit |
TGTAGATA | 18268 | 0.5590382387908518 | No Hit |
AGTAGATC | 6775 | 0.20732888481541611 | No Hit |
TGTAGAAC | 6173 | 0.18890645106502785 | Illumina DpnII expression Adapter 1 (100% over 8bp) |
TGTACATC | 6042 | 0.1848975825911061 | No Hit |
TGAAGATC | 6014 | 0.18404072520736714 | No Hit |
TGTAGATG | 4321 | 0.13223145554057755 | No Hit |
TCTAGATC | 4236 | 0.12963028133994134 | ABI Dynabead EcoP Oligo (100% over 8bp) |
TGGAGATC | 3298 | 0.1009255589846852 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)