FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004949414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7361808
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTACA725946598.60981161149543No Hit
ACGTTAAA153050.2078972991417326No Hit
ACATTACA115480.15686364001886494No Hit
ACGATACA109980.14939264919704506No Hit
ACGTAACA90580.12304042702553503No Hit
ACCTTACA78420.10652274549947513No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)