FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004949439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11492719
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG318970.27754093700542054No Hit
CACCAGGTGGTTTGGT221790.19298305300947496No Hit
TCCGAGTCTAAAGTAC178370.15520261132287322No Hit
TCTTTCCACATCAGGG121400.10563209628635312No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)