FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004949447

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949447
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6290752
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG170810.27152556641876835No Hit
ACTGTCCACAGGTCCC113950.18113891630126255No Hit
CTGGTGGACGCGGTTC111070.176560767297773No Hit
GTGGTTAACGGCCTGT95960.15254138138015932No Hit
AAGACAAACAGTACGG79020.125612963283245No Hit
GTGTACTGACAGTCCG78570.12489762750144974No Hit
GGGTGAATGGACAAAT68460.10882641693711657No Hit
TGTCCCATGGCCAGCT64630.10273811461650373No Hit
AGCTATCGACGGTTTA64530.1025791511094381No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)