FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004949490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14821539
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTACA1460779298.5578623110596No Hit
ACGTTAAA321560.21695452813638313No Hit
ACGATACA247470.1669664668426133No Hit
ACATTACA232930.15715641945144831No Hit
ACGTAACA184470.12446075943935377No Hit
ACCTTACA171480.11569648738906264No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)