FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004949553

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949553
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13636388
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCGACTTTCCATT399390.2928854767112816No Hit
AACTTACCTGAATCTC380840.27928216768252706No Hit
GGGGGGGGGGGGGGGG347040.25449554530129237No Hit
GCTGGACACGCCCTGA171820.12600110821135332No Hit
ATTACCTACCGAGGAT151440.11105580158030116No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)