FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14020928
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTACCTAC1383065498.64292862783405No Hit
TTACCTAA336680.24012675908470538No Hit
TTACATAC276620.19729079273497446No Hit
TTACCAAC257430.1836041095140065No Hit
ATACCTAC224230.15992522035631307No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)