FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004949597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2856648
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG86100.30140220286153563No Hit
ACTGTCCACAGGTCCC52940.18532209778733677No Hit
CTGGTGGACGCGGTTC49270.17247487264794262No Hit
GTGGTTAACGGCCTGT43850.15350158647477744No Hit
AAGACAAACAGTACGG37020.1295924454115453No Hit
GTGTACTGACAGTCCG35470.12416650563877663No Hit
GGGTGAATGGACAAAT31840.11145930475158297No Hit
AGCTATCGACGGTTTA30180.10564829828526301No Hit
TGTCCCATGGCCAGCT29020.10158759497144905No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)