FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004949604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14995535
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTACA1478751498.61278040430035No Hit
ACGTTAAA321400.2143304657019573No Hit
ACGATACA243840.16260840310132316No Hit
ACATTACA210030.1400616916968951No Hit
ACGTAACA177340.11826186928308993No Hit
ACCTTACA157840.10525799846420952No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)