FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3353392
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG90980.27130738070586435No Hit
ACTGTCCACAGGTCCC61490.183366573308459No Hit
CTGGTGGACGCGGTTC60030.1790127727387672No Hit
GTGGTTAACGGCCTGT50200.1496991702729654No Hit
AAGACAAACAGTACGG42230.1259321904507436No Hit
GTGTACTGACAGTCCG41700.12435170120284178No Hit
GGGTGAATGGACAAAT37150.11078335011236384No Hit
AGCTATCGACGGTTTA34100.10168808179896653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)