FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004949632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13608148
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG362750.26656823544247166No Hit
CCTAGCACTACAGGCA283540.2083604616881004No Hit
CGTTCTCGAATAACCC165250.1214345993297545No Hit
CATTCCTCTACGCGAA153300.11265309577761795No Hit
TCGATGATGTCCCGTT144850.10644358071355486No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)