FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004949650

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949650
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3139072
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG101440.32315282988093297No Hit
ACTGTCCACAGGTCCC57290.1825061674278258No Hit
CTGGTGGACGCGGTTC56330.17944793875387374No Hit
GTGGTTAACGGCCTGT49010.1561289451149894No Hit
GTGTACTGACAGTCCG39860.12698020306638394No Hit
AAGACAAACAGTACGG38800.1236034089055619No Hit
GGGTGAATGGACAAAT34250.10910867925297668No Hit
AGCTATCGACGGTTTA31970.10184538615234057No Hit
TGTCCCATGGCCAGCT31830.10139939447072256No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)