FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14091460
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTACA1390872398.70320747459809No Hit
ACGTTAAA293980.20862281126299193No Hit
ACATTACA215100.1526456449509135No Hit
ACGATACA208220.1477632551914422No Hit
ACGTAACA153670.10905186545609893No Hit
ACCTTACA141300.10027349898449132No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)