FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004949716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6574862
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCAGTCC638685297.14047230192816No Hit
CCCAGTCC437110.6648200372874746No Hit
ACCAGTCA407210.6193437976340797No Hit
ACCAGACC156040.23732817510086143No Hit
ACCACTCC139730.21252157079494596No Hit
ACAAGTCC112400.17095415842948491No Hit
ACCAGTAC75080.11419251080859187No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)