FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4231148
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACACCTGGCTCCTT124590.2944590924259799No Hit
TCGCGGTGAGTCTTGA110520.26120570587462316No Hit
GGGGGGGGGGGGGGGG109880.25969311402011935No Hit
GTTAAGAGAGTACGTT85340.20169467009898967No Hit
CGCTTACTGATCACAC74200.17536611813153308No Hit
TACCAGTGATACGATC72550.17146646725664053No Hit
ATCTTACTGGTTTGGT72300.17087561106347496No Hit
TTGTGGTGAAAGACAT70580.16681052045449604No Hit
ATAGATGGAGAGTAAT67080.15853853375017846No Hit
ATTCCTAACTGCGTGC67030.15842036251154532No Hit
ATATGCCGAGAACAGC65350.15444980889347287No Hit
TGGAACACTTGAGGCA61220.14468886458237812No Hit
GCTATACGACAGGTGA58870.139134816366622No Hit
CTTGACGCTCAGGGTA58160.1374567847780319No Hit
CTTTCTGCTCTTGTGA57680.13632234088715403No Hit
AGCTCTGCTGGCCTGT55650.13152458859864982No Hit
AGGTAGCGATTGACCA54100.12786128020102347No Hit
GCGGTTCGAAGCAAGC53710.12693954453968523No Hit
AGTTCACGACCAGAGA51410.12150366756256221No Hit
ACTGGAACTCTGGAAG51060.12067646889213045No Hit
TGTGACTGACCGTTAA50660.11973109898306558No Hit
ACCCTTTCTAGGTGAC50490.11932931677171302No Hit
TGTACCCTGCTGAGAG49220.11632776731043207No Hit
TTCCAAACTCCGCTAG48130.11375163430823029No Hit
TCCCAGACTCCTAACA47560.11240448218781285No Hit
ACACTCCACCGTACAT46460.10980471493788448No Hit
TCAGTCCACCCAGCAC45830.1083157573311073No Hit
CACAGCTCTCTCTGGG44840.10597596680617175No Hit
CAGTGGAGAGATCATC44330.10477062017211405No Hit
ACATGTGTGTCAATGC43810.10354163929032971No Hit
GAACTACTGGCCCTGA42970.10155636248129349No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)