FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949843

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949843
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8022156
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACGTTT784620597.80668688068394No Hit
GCACGTTA743810.9271946344598634No Hit
GCACGGTT125090.15593065006464596No Hit
GCACGATT110270.13745681335541218No Hit
GCACGTAT109370.13633492043784737No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)