FastQCFastQC Report
Sat 10 Sep 2022
EGAF00004949846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7744465
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG253310.3270852150535899No Hit
ACTGTCCACAGGTCCC146860.18963220829327784No Hit
CTGGTGGACGCGGTTC138390.17869536501230232No Hit
GTGGTTAACGGCCTGT119980.15492354862472746No Hit
AAGACAAACAGTACGG101470.131022607759219No Hit
GTGTACTGACAGTCCG96930.1251603564610338No Hit
GGGTGAATGGACAAAT84590.10922639588402815No Hit
TGTCCCATGGCCAGCT82390.10638565736948905No Hit
AGCTATCGACGGTTTA82040.10593372169672147No Hit
CATTCAACTCATCTTT78140.10089786705731124No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)