FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949860

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949860
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4274021
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG117660.27529111345030827No Hit
ACTGTCCACAGGTCCC79580.18619468645568188No Hit
CTGGTGGACGCGGTTC74210.17363040565313087No Hit
GTGGTTAACGGCCTGT65770.15388319336755715No Hit
AAGACAAACAGTACGG53970.12627453164128113No Hit
GTGTACTGACAGTCCG53910.1261341486155543No Hit
GGGTGAATGGACAAAT47820.11188527150428135No Hit
AGCTATCGACGGTTTA43590.10198826819054002No Hit
TGTCCCATGGCCAGCT43270.10123955871999693No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)