FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004949877

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949877
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14856529
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG373150.2511690314743101No Hit
CCTAGCACTACAGGCA326210.21957349526258793No Hit
CGTTCTCGAATAACCC181050.12186561208206842No Hit
CATTCCTCTACGCGAA164200.11052379731497175No Hit
TCGATGATGTCCCGTT163430.11000550666982846No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)