FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949896

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949896
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5678289
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG170720.3006539469900176No Hit
ACTGTCCACAGGTCCC106090.1868344496026884No Hit
CTGGTGGACGCGGTTC101310.17841642086198853No Hit
GTGGTTAACGGCCTGT87060.15332083308898156No Hit
AAGACAAACAGTACGG72880.1283485218874911No Hit
GTGTACTGACAGTCCG71340.12563643731412755No Hit
AGCTATCGACGGTTTA60070.10578890929996694No Hit
TGTCCCATGGCCAGCT59140.10415109199267596No Hit
GGGTGAATGGACAAAT58580.10316487942054375No Hit
CATTCAACTCATCTTT57030.10043518390839212No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)